Cell-type markers

cell_type_markers

Format

An object of class list of length 3.

Examples

data(cell_type_markers) cell_type_markers
#> $homoSapiens #> CellTypeMarkers #> Homo sapiens (Ensembl 92) #> b_cell(24): CD19 IGHA1 ... IGLC3 IGLC7 #> dendritic_cell(24): HLA-DMA HLA-DMA.1 ... HLA-DRB4.1 ITGAX #> gut_epithelial_cell(24): APC ATOH1 ... PRDM1 REG4 #> macrophage(24): CCR5 CD68 ... IL1B ITGAM #> mesenchymal_stem_cell(24): CD44 ENG ... NT5E THY1 #> monocyte(24): FCGR1A NDUFA2 ... FCGR1A NDUFA2 #> natural_killer_cell(24): NCAM1 ... NCAM1 #> t_cell(24): CD247 CD3D ... CD8B IL2RA #> #> $musMusculus #> CellTypeMarkers #> Mus musculus (Ensembl 92) #> b_cell(22): Blnk Cd19 ... Ptprc Sfn #> basophil(22): Alox5 Cd200r3 ... Scin Stx3 #> dendritic_cell_conventional(22): Cd209a Cd24a ... Itgax Thbd #> dendritic_cell_plasmacytoid(22): Bst2 Gpr183 ... Jchain Tspan13 #> endothelial_cell(22): Cdh5 Cldn5 ... Sele Vwf #> eosinophil(22): Alox5 Cd63 ... Siglec5 Stx3 #> erythrocyte(22): Asns Car1 ... Sptb Trib2 #> fibroblast(22): Cd47 Col1a1 ... S100a4 Vim #> luminal_progenitor(22): Cd14 Elf5 ... Elf5 Kit #> macrophage(22): Adgre1 Aif1 ... Spi1 Vim #> mast_cell(22): Itgb7 Kit ... Itgb7 Kit #> mature_luminal_cell(22): Epcam Esr1 ... Krt8 Muc1 #> megakaryocyte(22): Cavin2 Ccl5 ... Rab27b Treml1 #> monocyte(22): Ccl2 Cd14 ... S100a9 Vmo1 #> myeloid_derived_suppressor_cell(22): Cd33 Fut4 ... Fut4 Itgam #> myoepithelial_cell(22): Acta2 Krt14 ... Krt5 Vim #> myofibroblast(22): Acta2 Fn1 ... Tnnt3 Vim #> natural_killer_cell(22): Ccl5 Fcgr3 ... Ncam1 Nkg7 #> neutrophil(22): B4galt6 Cd63 ... Ly6g Trem3 #> regulatory_t_cell_treg(22): Cd3e Foxp3 ... Cd3e Foxp3 #> t_cell(22): Cd2 Cd244 ... Pdcd1 Trac #> t_cell_cd4(22): Cd3e Cd4 ... Cd4 Il7r #> t_cell_cd8(22): Ccl5 Cd3e ... Cd8b1 Nkg7 #> #> $drosophilaMelanogaster #> CellTypeMarkers #> Drosophila melanogaster (Ensembl 92) #> crystal_cell(5): klu lz ... PPO1 Sox102F #> lamellocyte(5): 14-3-3zeta atilla ... pnt tx #> plasmatocyte(5): bbx bon ... Sox102F ttk #> prohemocyte(5): dome h ... Tep4 wg #>